species:   Venon
pid:       PID2102
parent:    vna-miR-2-5p
paralog:   
locus:     PDEZ01000011.1:123112-123169
matures:   ['ACGGGUCCGGAUAUGCAGCUUG', 'UCUCAUGUUCGGGCCCGUGG']
srr:       SRR11514759
genome:    /Users/jax/+Genomes/Fungal_genomes/Venon.GCA_002776445.1_ASM277644v1_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Jesenicnik2022-cp.SRR11514759.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Jesenicnik2022-cp.SRR11514759.cram PDEZ01000011.1:123112-123169

1 out of bounds
4 alignments
3 proper strand
3 stranded perfect matches

              **************      ************            
GCCUUACGGGUCCGGAUAUGCAGCUUGCUCAGUAGCCUCUCAUGUUCGGGCCCGUGGC
(((..(((((((((((((((.((...(((....)))..))))))))))))))))))))
-----ACGGGUCCGGAUAUGCAGCUUG------------------------------- l=22 a=0 c
-------------------------------------UCUCAUGUUCGGGCCCGUGG- l=20 a=0 c*
----------------UAUGCAGCUUGC------------------------------ l=12 a=2 ma
------------------------------------CUCUCAUGUU------------ l=10 a=0 ma*

----------------UAUGCAGCUUGC------------------------------ l=12 a=2 (ma)
------CGGGUCCGGAUAUG-------------------------------------- l=14 a=1 

mb-01011
ax-1011001
ku-01
ss-101010111100
fn-001
